Information for 10-CTCTCTCACCTCC (Motif 20)

A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
Reverse Opposite:
A C T G C T A G C T G A A C T G A C T G G A C T A C T G C G T A A T C G T C G A A C T G T C G A A C T G
p-value:1e-9
log p-value:-2.182e+01
Information Content per bp:1.795
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif70.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets46.7 +/- 27.9bp
Average Position of motif in Background48.0 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCTCTCACCTCC
---TGACACCT--
 A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCTCTCACCTCC
---TCACACCT--
 A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCTCTCACCTCC
---TCACACCT--
 A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTCTCTCACCTCC
---TCACACCT--
 A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:5
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CTCTCTCACCTCC
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTCTCTCACCTCC
---TCACACCT--
 A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCACCTCC
CTGTCTGTCACCT--
 A C G T A C G T A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTCTCTCACCTCC
---TCACACCT--
 A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTCTCTCACCTCC
---CCTCACCTG-
 A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCTCTCACCTCC
-TTTCACACCTN-
 A G T C A C G T A G T C A G C T A T G C C G A T A G T C C G T A G T A C A G T C A G C T A G T C G T A C
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T