Information for 7-GVCTCCAHGCAGG (Motif 17)

A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G
Reverse Opposite:
A G T C A G T C C A G T A C T G G T A C C A T G A G C T A C T G A C T G C T G A A C T G A T G C A T G C
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.766
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif64.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets62.0 +/- 17.6bp
Average Position of motif in Background48.5 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GVCTCCAHGCAGG
-----CACGCA--
 A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GVCTCCAHGCAGG
--ATCCAC-----
 A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GVCTCCAHGCAGG--
GGCCYCCTGCTGDGH
 A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GVCTCCAHGCAGG-
NRGCCCCRCCCHBNN
 A C G T A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GVCTCCAHGCAGG
-GCTCCG------
 A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GVCTCCAHGCAGG--
GACCCCCCGCTGTGC
 A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GVCTCCAHGCAGG---
----CACAGCAGGGGG
 A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GVCTCCAHGCAGG
AGACCCCCCACGAAGC
 A C G T A C G T A C G T A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GVCTCCAHGCAGG
--TBGCACGCAA-
 A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GVCTCCAHGCAGG
GACCCCCCACGAAG-
 A C G T A C G T A T C G T A C G A G T C A G C T G T A C A G T C C T G A G A T C A C T G A G T C G T C A C T A G A C T G
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G A C G T