Information for 6-SWCAGSASACACA (Motif 16)

A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A
Reverse Opposite:
A C G T A C T G C G A T C T A G C A G T T A C G A C G T A T G C A G T C A C G T A C T G C G A T A T C G
p-value:1e-9
log p-value:-2.297e+01
Information Content per bp:1.653
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.2 +/- 19.6bp
Average Position of motif in Background84.0 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:SWCAGSASACACA
CACAGN-------
 A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:SWCAGSASACACA---
AGCGGCACACACGCAA
 A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---SWCAGSASACACA
TGAGTCAGCA------
 A C G T A C G T A C G T A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SWCAGSASACACA
GTCAGCANNTN--
 A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----SWCAGSASACACA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----SWCAGSASACACA
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SWCAGSASACACA
TGACAGGTGTCA--
 A C G T A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:SWCAGSASACACA
NACAGGAAAT---
 A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SWCAGSASACACA
TGACAGGTGTCA--
 A C G T A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SWCAGSASACACA--
---AGGAAACAGCTG
 A T G C C G T A T G A C C G T A T C A G T A C G T G C A A T G C G C T A G A T C G C T A T A G C G T C A A C G T A C G T
A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G