Information for 5-CCBTGCTGCBGTS (Motif 15)

A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
Reverse Opposite:
A T C G G T C A T A G C T G A C T C A G A T G C T C G A A C T G T G A C T C G A T A G C T C A G T A C G
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.469
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.60%
Number of Background Sequences with motif467.1
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets47.6 +/- 23.2bp
Average Position of motif in Background49.3 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCBTGCTGCBGTS
CCCCCTGCTGTG---
 A C G T A C G T A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCBTGCTGCBGTS
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCBTGCTGCBGTS
TCNCCTGCTGNGNNN
 A C G T A C G T A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCBTGCTGCBGTS
TNTCCTGCTGTGNNG
 A C G T A C G T A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCBTGCTGCBGTS
NNTCCTGCTGTGNNN
 A C G T A C G T A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCBTGCTGCBGTS
---NGCTN-----
 A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCBTGCTGCBGTS
-CCTGCTGAGH--
 A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCBTGCTGCBGTS
----GCTGTG---
 A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCBTGCTGCBGTS
CNGTCCTCCC---
 A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCBTGCTGCBGTS
----GCTCCG---
 A T G C A G T C A T C G A G C T A C T G T G A C A G C T T A C G A G T C A C T G A T C G C A G T T A G C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T