Information for 1-AMACCGAGACAAAAGC (Motif 1)

C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
Reverse Opposite:
A T C G A T G C A G C T A C G T A C G T A C G T A T C G C G A T A T G C A C G T G T A C C A T G A C T G A C G T C A T G C G A T
p-value:1e-16
log p-value:-3.883e+01
Information Content per bp:1.728
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.4 +/- 24.6bp
Average Position of motif in Background61.3 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AMACCGAGACAAAAGC
CTGATCGAAACCAAAGT
 A C G T C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AMACCGAGACAAAAGC
ATAAACCGAAACCAA---
 A C G T A C G T C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AMACCGAGACAAAAGC
TCGAAACCGAAACT-----
 A C G T A C G T A C G T C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AMACCGAGACAAAAGC
CAAATCCAGACATCACA
 A C G T C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AMACCGAGACAAAAGC
CGTATCGAAACCAAA--
 A C G T C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AMACCGAGACAAAAGC
NNNACCGAGAGTNNN--
 A C G T C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AMACCGAGACAAAAGC
GNNACCGAGAATNNN--
 A C G T C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AMACCGAGACAAAAGC
AACGAAACCGAAACT-----
 A C G T A C G T A C G T A C G T C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AMACCGAGACAAAAGC
-----AAAACAAAGG-
 C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AMACCGAGACAAAAGC
CAAAATCGAAACTAA---
 A C G T A C G T C G T A G T A C T C G A A G T C G A T C A C T G G T C A A T C G C G T A A T G C T C G A G T C A G T C A C T G A A T C G A T G C
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T A C G T