p-value: | 1e-11 |
log p-value: | -2.636e+01 |
Information Content per bp: | 1.771 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.84% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 64.1 +/- 25.5bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.40 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GACACVGTGBTDGACA GTCACGCTCNCTGA-- |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 10 |
Orientation: | forward strand |
Alignment: | GACACVGTGBTDGACA-- ----------TTGACAGG |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 10 |
Orientation: | forward strand |
Alignment: | GACACVGTGBTDGACA- ----------TTGACAG |
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PH0164.1_Six4/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GACACVGTGBTDGACA ATAAATGACACCTATCA----- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 10 |
Orientation: | forward strand |
Alignment: | GACACVGTGBTDGACA-- ----------TTGACAGC |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GACACVGTGBTDGACA ----AGGTGHCAGACA |
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Pax2/MA0067.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GACACVGTGBTDGACA AGTCACGC--------- |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GACACVGTGBTDGACA ARNTGACA------------ |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GACACVGTGBTDGACA- ----AGGTGNCAGACAG |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GACACVGTGBTDGACA-- ------NTGATTGACAGN |
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