Information for 13-TAAAACCWAATTT (Motif 26)

A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T
Reverse Opposite:
C G T A C T G A C G T A C G A T C G A T C G T A A C T G A T C G A C G T A C G T A C G T A C G T C G T A
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.800
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets25.7 +/- 24.2bp
Average Position of motif in Background62.4 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAAAACCWAATTT
ACTGAAACCA-----
 A C G T A C G T A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAAAACCWAATTT-----
-CAAAGCTAATTAGNTTN
 A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

GRHL1/MA0647.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAAAACCWAATTT
-AAAACCGGTTTT
 A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T
A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAAAACCWAATTT
NCYAATAAAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAAAACCWAATTT
--AAACCACANN-
 A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAAAACCWAATTT
NGYCATAAAWCH------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TAAAACCWAATTT
CTACCAATAAAATTCT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TAAAACCWAATTT
CCAATAAAAA-------
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAAAACCWAATTT-----
-GCAACCTCATTATNNNN
 A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAAAACCWAATTT
-NTAATBNAATTA
 A C G T G T C A C G T A C G T A C G T A A T G C A G T C C G A T G C T A C G T A A C G T A G C T G C A T
A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A