Information for 1-CACACTCAAACAC (Motif 1)

A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C
Reverse Opposite:
C T A G C G A T C T A G C A G T A C G T A G C T A C T G C T G A T A C G A C G T T A C G A G C T A C T G
p-value:1e-15
log p-value:-3.572e+01
Information Content per bp:1.810
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.6 +/- 27.6bp
Average Position of motif in Background70.9 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACACTCAAACAC
GCCACACCCA-----
A C G T A C G T A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CACACTCAAACAC
GGCCACACCCAN----
A C G T A C G T A C G T A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACACTCAAACAC-
GACCACATTCATACAAT
A C G T A C G T A C G T A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACACTCAAACAC
CGGTTTCAAA---
A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACACTCAAACAC
GGCCACACCCA-----
A C G T A C G T A C G T A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CACACTCAAACAC
WNAGTCADAVTGAAACTN
A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACACTCAAACAC----
AACACCAAAACAAAGGA
A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CACACTCAAACAC
--NATTCAAAT--
A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CACACTCAAACAC
---AAATAAACA-
A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CACACTCAAACAC
AGCCACTCAAG---
A C G T A G T C C T G A A T G C C G T A A G T C A G C T A G T C C T G A G T C A G T C A A G T C C G T A A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T