Information for 7-GTGCCTGCCTAGG (Motif 9)

A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G
Reverse Opposite:
A G T C A G T C C G A T C T G A A C T G A T C G T A G C C G T A A C T G T A C G G T A C T G C A A G T C
p-value:1e-13
log p-value:-3.169e+01
Information Content per bp:1.768
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.3 +/- 17.1bp
Average Position of motif in Background73.9 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGCCTGCCTAGG-
GGGGCTYGKCTGGGA
 A C G T A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGCCTGCCTAGG
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGCCTGCCTAGG
ATGCCAACC----
 A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGCCTGCCTAGG---
--ACATGCCCGGGCAT
 A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GTGCCTGCCTAGG--
-----TGCCCAGNHW
 A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GTGCCTGCCTAGG---
-----TGCCTGAGGCN
 A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGCCTGCCTAGG
ATGCCCACC----
 A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTGCCTGCCTAGG---
-----NGCCTGAGGCN
 A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTGCCTGCCTAGG---
-----NGCCTNAGGCN
 A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTGCCTGCCTAGG
AGGTGHCAGACA---
 A C G T A C G T A C T G A C G T A C T G A T G C A G T C G C A T A C T G A T G C A G T C A G C T G C T A C T A G A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T