Information for 2-GSCGGGGCKGCAGCCG (Motif 5)

A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
Reverse Opposite:
T A G C A T C G A T C G A G T C A C G T C A T G A G T C G T A C A C T G A T G C A T G C T G A C T A G C A C T G A T C G G T A C
p-value:1e-15
log p-value:-3.608e+01
Information Content per bp:1.739
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.4 +/- 27.3bp
Average Position of motif in Background63.1 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GSCGGGGCKGCAGCCG
GGGGGCGGGGCC-------
 A C G T A C G T A C G T A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GSCGGGGCKGCAGCCG
NAGANTGGCGGGGNGNA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GSCGGGGCKGCAGCCG
----GGGCGGGACC--
 A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GSCGGGGCKGCAGCCG
AGGGGGCGGGGCTG------
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GSCGGGGCKGCAGCCG--
------NNAGCAGCTGCT
 A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GSCGGGGCKGCAGCCG
GGNGCGNCTGTTNNN-
 A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------GSCGGGGCKGCAGCCG
GGGNGGGGGCGGGGC--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GSCGGGGCKGCAGCCG
DGGGYGKGGC--------
 A C G T A C G T A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GSCGGGGCKGCAGCCG
MKGGGYGTGGCC-------
 A C G T A C G T A C G T A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GSCGGGGCKGCAGCCG
NNTNAGGGGCGGNNNN--
 A C G T A C G T A C T G A T G C A G T C A C T G A C T G A T C G A T C G A G T C A C T G A C T G G T A C G T C A A C T G A T G C T A G C A T C G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T