Information for 17-GCTCACGGCC (Motif 33)

A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C
Reverse Opposite:
A C T G T A C G G T A C G T A C A C T G A C G T A T C G G T C A C T A G A G T C
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.743
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif56.4
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets49.7 +/- 29.7bp
Average Position of motif in Background48.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GCTCACGGCC-
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCTCACGGCC---
AAGTTCAAGGTCAGC
 A C G T A C G T A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCTCACGGCC-
TTTGCACACGGCAC
 A C G T A C G T A C G T A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTCACGGCC-
-NTCAAGGTCA
 A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCTCACGGCC-
---CTAGGCCT
 A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTCACGGCC-
AGGTCAAGGTCA
 A C G T A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTCACGGCC
TGCGCAGGCGC
 A C G T A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCTCACGGCC--
CCGCCCAAGGGCAG
 A C G T A C G T A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTCACGGCC-
AGGTCAAGGTCA
 A C G T A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTCACGGCC---
---CAAGGHCANV
 A C T G A G T C C A G T A T G C T G C A T G A C A C T G A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G