Information for 11-AGCTGGCCAGAAA (Motif 18)

C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A
Reverse Opposite:
A G C T G A C T C G A T A T G C A C G T A C T G T C A G G T A C A T G C C T G A A T C G A T G C C G A T
p-value:1e-11
log p-value:-2.740e+01
Information Content per bp:1.737
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.3 +/- 26.6bp
Average Position of motif in Background38.3 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGCTGGCCAGAAA
---TGCCCAGNHW
 C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGCTGGCCAGAAA
---ATGCCAGACN
 C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCTGGCCAGAAA--
AGATGKDGAGATAAG
 C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A A C G T A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGCTGGCCAGAAA---
------CCAGACRSVB
 C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGCTGGCCAGAAA-
------CCAGACAG
 C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCTGGCCAGAAA-
NGCTTTCTAGGAAN
 C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCCAGAAA
NAACAGCTGG-------
 A C G T A C G T A C G T A C G T C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGCTGGCCAGAAA-----
-CAAATCCAGACATCACA
 C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGCTGGCCAGAAA
VCAGCTGBNN-----
 A C G T A C G T C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCCAGAAA
NAHCAGCTGD-------
 A C G T A C G T A C G T A C G T C G T A T A C G A T G C A G C T T A C G C A T G A G T C A G T C C G T A A T C G G C T A C T G A T C G A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T