Information for 4-CCAGAGSAYTCST (Motif 5)

A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T
Reverse Opposite:
C G T A A T C G T C A G C G T A C T G A A C G T A T C G A G T C A C G T A G T C A C G T A C T G A T C G
p-value:1e-12
log p-value:-2.934e+01
Information Content per bp:1.890
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.4 +/- 18.2bp
Average Position of motif in Background44.8 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAGSAYTCST
ATGCCAGACN------
 A C G T A C G T A C G T A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGSAYTCST
TTCTAGAACGTTC--
 A C G T A C G T A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGSAYTCST
TTCTAGAACGTTC--
 A C G T A C G T A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGSAYTCST
TTCTAGAACGTTC--
 A C G T A C G T A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCAGAGSAYTCST
-CAGCTGTTTCCT
 A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCAGAGSAYTCST--
-----RCATTCCWGG
 A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGSAYTCST
TTCTAGAABNTTCTA
 A C G T A C G T A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCAGAGSAYTCST--
-----GCATTCCAGN
 A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCAGAGSAYTCST
GTCCCCAGGGGA-----
 A C G T A C G T A C G T A C G T A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCAGAGSAYTCST--
NNNNTGAGCACTGTNNG
 A C G T A C G T A T G C A G T C C G T A A C T G C G T A A C T G A T G C C G T A A G C T A C G T A G T C A T G C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G