Information for 19-ACTTTAAAGTAAGCCT (Motif 35)

C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
Reverse Opposite:
C T G A C T A G A C T G A G T C A C G T G A C T C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T
p-value:1e-6
log p-value:-1.445e+01
Information Content per bp:1.887
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.2 +/- 33.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ACTTTAAAGTAAGCCT
ATAACCACTTGAAAATT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTTTAAAGTAAGCCT
ACWTCAAAGG------
 C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTTTAAAGTAAGCCT
AAAGATCAAAGGAA----
 A C G T A C G T C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACTTTAAAGTAAGCCT
ACATCAAAGG------
 C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACTTTAAAGTAAGCCT
ACATCAAAGGNA----
 C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ACTTTAAAGTAAGCCT
TAAGCCACTTGAAATT------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACTTTAAAGTAAGCCT
NATTCAAAT-------
 C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ACTTTAAAGTAAGCCT
TAAGCCACTTGAATTT------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACTTTAAAGTAAGCCT
CCACTTGAA---------
 A C G T A C G T C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ACTTTAAAGTAAGCCT
TATAGATCAAAGGAAAA--
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A C T A G A C G T C G T A C G T A A C T G A G T C A G T C A G C T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T