Information for 14-TTTTATSTGGGGGMAR (Motif 23)

A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
Reverse Opposite:
A G C T A G C T A C T G A G T C G T A C T A G C G A T C A G T C G T C A A T G C C G T A C G A T G T C A C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.705
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets40.2 +/- 24.3bp
Average Position of motif in Background45.3 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TTTTATSTGGGGGMAR
TTTTATKRGG------
 A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATSTGGGGGMAR
NTTTTATTGG-------
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTTATSTGGGGGMAR
TTTTATTRGN------
 A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATSTGGGGGMAR
NTTTTATTGG-------
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATSTGGGGGMAR
TTTTTATTGG-------
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATSTGGGGGMAR
NNAATTTTATTGGNTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATSTGGGGGMAR
NNANTTTTATTGGNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTATSTGGGGGMAR
TTTAATTGCN------
 A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATSTGGGGGMAR
NTTTTACGAGN------
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTTATSTGGGGGMAR
NAATTTTACGAGNTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G C A G T A C T G C A T G A C T G A C T G C T A G T G A C C T G A T C G A
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T A C G T A C G T