Information for 12-ARAGTAMWRACTC (Motif 22)

C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G C T A G T C C G T A A C G T A G C T C G T A A G T C A C G T A G T C A C G T
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 23.2bp
Average Position of motif in Background45.6 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ARAGTAMWRACTC
AAAGTAAACA---
 C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ARAGTAMWRACTC
AAAGTAAACA---
 C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ARAGTAMWRACTC-
---GAAATGACTCA
 C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ARAGTAMWRACTC
TAAAAATGCTGACTT
 A C G T A C G T C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ARAGTAMWRACTC--
-AGGAGATGACTCAT
 C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C A C G T A C G T
A C G T C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ARAGTAMWRACTC
NCTAAGTAAACA---
 A C G T A C G T C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ARAGTAMWRACTC
WAAGTAAAYA---
 C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ARAGTAMWRACTC---
ACNNTAATTACNNCAN
 C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C A C G T A C G T A C G T
T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ARAGTAMWRACTC-
CAAAGTAAACANNNN
 A C G T C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ARAGTAMWRACTC--
GAAAATTAATTACTTCG
 A C G T A C G T C G T A C T A G C G T A A C T G A C G T C T G A G T C A C G A T C T A G C T G A A G T C A C G T A G T C A C G T A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G