Information for 12-BAAMHAAGRAAMATGR (Motif 19)

A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G
Reverse Opposite:
G A T C A G T C G T C A C A G T C A T G G A C T C A G T A G C T A G T C A C G T A C G T C G A T A C T G A C G T A C G T T G C A
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.547
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif11.53%
Number of Background Sequences with motif2614.4
Percentage of Background Sequences with motif5.37%
Average Position of motif in Targets52.6 +/- 22.6bp
Average Position of motif in Background49.0 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----BAAMHAAGRAAMATGR
AGAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----BAAMHAAGRAAMATGR
ATAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:BAAMHAAGRAAMATGR
---NACAGGAAAT---
 A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:BAAMHAAGRAAMATGR
-AAATAAGAAAAAAC-
 A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G
A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:BAAMHAAGRAAMATGR
------AAAACAATGG
 A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:BAAMHAAGRAAMATGR--
--AAACAGACAAAGGAAT
 A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:BAAMHAAGRAAMATGR---
-------GWAAYHTGABMC
 A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----BAAMHAAGRAAMATGR
TATAGATCAAAGGAAAA---
 A C G T A C G T A C G T A C G T A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:BAAMHAAGRAAMATGR
----ACAGGATGTGGT
 A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:BAAMHAAGRAAMATGR
---NDCAGGAARTNN-
 A C G T T C G A T G C A T G A C G C T A T G C A C G T A C T A G T C G A G T C A C G T A G T A C G C T A A C G T C T A G C T A G
A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T