Information for 5-KRGAWTCTCMAWRMCA (Motif 13)

A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G C T C G A T A C G T A C G T A C T G C G T A C T A G C G T A C G T A A C G T A T G C A G T C G T A C
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.805
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.8 +/- 11.1bp
Average Position of motif in Background64.5 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KRGAWTCTCMAWRMCA
GGGAATTTCC------
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:KRGAWTCTCMAWRMCA
---ATTTTCCATT---
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KRGAWTCTCMAWRMCA
GGGAATTTCC------
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KRGAWTCTCMAWRMCA
NNAATTCTCGNTNAN-
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KRGAWTCTCMAWRMCA
---ATTTTCCATT---
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:KRGAWTCTCMAWRMCA---
----ATTTGCATAACAAAG
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KRGAWTCTCMAWRMCA--
---AAGTTCAAGGTCAGC
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:KRGAWTCTCMAWRMCA---
----ATTTGCATAACAATG
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:KRGAWTCTCMAWRMCA
AGTATTCTCGGTTGC-
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:KRGAWTCTCMAWRMCA
----TTTTCCA-----
 A C T G C T A G A T C G C G T A C G A T A C G T A G T C A C G T A G T C G T C A C G T A C G T A C T G A G T C A A G T C C G T A
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T