Information for 5-TTMATTCATCAKGAAW (Motif 8)

A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A
Reverse Opposite:
C G A T C G A T C G A T G T A C G T C A C G A T C T A G G T C A A G C T A C T G C G T A G T C A C G A T A C G T G T C A C G T A
p-value:1e-13
log p-value:-2.994e+01
Information Content per bp:1.771
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.6 +/- 27.4bp
Average Position of motif in Background52.3 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTMATTCATCAKGAAW
--ATTGCATCAT----
 A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A
A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTMATTCATCAKGAAW
--ATTGCATCAK----
 A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A
A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTMATTCATCAKGAAW
GYCATCMATCAT----
 A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTMATTCATCAKGAAW
NNCATTCATTCATNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTMATTCATCAKGAAW--
-TCACCCATCAATAAACA
 A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A A C G T A C G T
A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

ATF4/MA0833.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTMATTCATCAKGAAW
-TATTGCATCATCC--
 A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A
A C G T A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTMATTCATCAKGAAW---
-WNAGTCADAVTGAAACTN
 A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTMATTCATCAKGAAW-
--BAGTCATANTGAAAG
 A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A A C G T
A C G T A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTMATTCATCAKGAAW
-TCATCAATCA-----
 A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A
A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTMATTCATCAKGAAW
--ATGACATCATCNN-
 A C G T A C G T G T C A G C T A C A G T C G A T A G T C C T G A C A G T A G T C C G T A A C G T C A T G C G T A C G T A C G T A
A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T A C G T