Information for 4-GCCATCTWGTGGC (Motif 5)

C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C
Reverse Opposite:
A C T G G T A C A G T C C G T A A T G C C G A T T C G A A T C G T C G A C A G T C T A G C A T G G A T C
p-value:1e-16
log p-value:-3.700e+01
Information Content per bp:1.657
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif115.6
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets60.3 +/- 24.6bp
Average Position of motif in Background52.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----GCCATCTWGTGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCTWGTGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.80
Offset:-7
Orientation:forward strand
Alignment:-------GCCATCTWGTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:GCCATCTWGTGGC-
--------GTGGAT
 C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCATCTWGTGGC
---RTCATGTGAC
 C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C
A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCTWGTGGC
GCCGCCATCTTG----
 A C G T A C G T A C G T C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCTWGTGGC
GCNGCCATCTTG----
 A C G T A C G T A C G T C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCCATCTWGTGGC
-----CACGTGGC
 C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCATCTWGTGGC---
NANTTTCAAGTGGTTAN
 A C G T C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCATCTWGTGGC
GCCATCTGTT---
 C T A G G T A C A G T C G T C A A G C T A T G C A G C T G C T A T A C G G A C T A C T G C A T G T G A C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T