Information for 1-TGGGAATTGTAGTTTT (Motif 2)

A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
Reverse Opposite:
G T C A C T G A C T G A G T C A A G T C A G C T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C C T G A
p-value:1e-44
log p-value:-1.025e+02
Information Content per bp:1.768
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.71%
Number of Background Sequences with motif26.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.5 +/- 25.8bp
Average Position of motif in Background53.4 +/- 47.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:TGGGAATTGTAGTTTT
-GGGAATTGTAGT---
 A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.87
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAATTGTAGTTTT
GCMTBCTGGGAGTTGTAGTY--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAATTGTAGTTTT
GCATTCTGGGAATTGTAGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAATTGTAGTTTT
CSTGGGAAAD--------
 A C G T A C G T A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGGGAATTGTAGTTTT
----NNHTGTGGTTWN
 A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGGGAATTGTAGTTTT
------CTGTGGTTTN
 A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGGGAATTGTAGTTTT
-----NNTGTGGTTT-
 A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGGGAATTGTAGTTTT
-----GCTGTGGTTT-
 A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGAATTGTAGTTTT
RGSMTBCTGGGAAAT--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGGAATTGTAGTTTT
TGGGCGACGTCGTTAA
 A G C T C T A G A C T G C T A G T G C A C T G A G C A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A G C T C A G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A