p-value: | 1e-11 |
log p-value: | -2.548e+01 |
Information Content per bp: | 1.835 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 2.28% |
Number of Background Sequences with motif | 130.3 |
Percentage of Background Sequences with motif | 0.28% |
Average Position of motif in Targets | 55.6 +/- 19.9bp |
Average Position of motif in Background | 55.6 +/- 29.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCAAGGCAAT- -CAAGGHCANV |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCAAGGCAAT NTCAAGGTCA- |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCAAGGCAAT BTCAAGGTCA- |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCAAGGCAAT NGTTGCCATGGCAA- |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCAAGGCAAT GGTTGCCATGGCAA- |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCAAGGCAAT GTTGCCATGGCAAC |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCAAGGCAAT--- --AAGGCAAGTGT |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CCAAGGCAAT KGTTGCCATGGCAAC |
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EBF1/MA0154.3/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCAAGGCAAT ATTCCCAAGGGAAT |
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PB0014.1_Esrra_1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCAAGGCAAT---- TATTCAAGGTCATGCGA |
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