Information for 12-GACGGCGAGATCWGCC (Motif 23)

T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
Reverse Opposite:
C T A G C T A G A T G C C G T A A T C G C G T A A C G T A T G C A G C T A G T C C T A G G T A C A G T C A C T G A C G T A G T C
p-value:1e-9
log p-value:-2.167e+01
Information Content per bp:1.680
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif44.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets40.1 +/- 25.3bp
Average Position of motif in Background51.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARA(var.2)/MA0730.1/Jaspar

Match Rank:1
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GACGGCGAGATCWGCC
TGACCTTTGCATGACCT
 A C G T T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.45
Offset:-2
Orientation:forward strand
Alignment:--GACGGCGAGATCWGCC
TTGACAGC----------
 A C G T A C G T T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.45
Offset:-1
Orientation:forward strand
Alignment:-GACGGCGAGATCWGCC
AGATGKDGAGATAAG--
 A C G T T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.45
Offset:2
Orientation:reverse strand
Alignment:GACGGCGAGATCWGCC---
--CCNNACCATCTGGCCTN
 T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--GACGGCGAGATCWGCC
BTGACCTCTNNHTGACCY
 A C G T A C G T T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.45
Offset:-2
Orientation:forward strand
Alignment:--GACGGCGAGATCWGCC
TTGACAG-----------
 A C G T A C G T T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.45
Offset:-3
Orientation:reverse strand
Alignment:---GACGGCGAGATCWGCC
CCAGACAG-----------
 A C G T A C G T A C G T T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:8
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-GACGGCGAGATCWGCC
TGACCTCTCNNTGACCT
 A C G T T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.44
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGCGAGATCWGCC
GTATTGACAGCTNNTT-----
 A C G T A C G T A C G T A C G T A C G T T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.44
Offset:-2
Orientation:forward strand
Alignment:--GACGGCGAGATCWGCC
TTGACAGG----------
 A C G T A C G T T C A G C G T A G T A C T C A G A C T G A G T C T C A G C T G A T A C G G T C A A C G T A T G C G C A T T A C G A G T C A G T C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T