Information for 6-CACAGTDCCTCAG (Motif 16)

A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
Reverse Opposite:
A G T C A C G T C T A G T G C A A T C G A C T G G A T C G T C A G T A C A C G T A C T G A C G T A C T G
p-value:1e-10
log p-value:-2.463e+01
Information Content per bp:1.838
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 17.2bp
Average Position of motif in Background63.3 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACAGTDCCTCAG
CACAGN-------
 A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACAGTDCCTCAG
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CACAGTDCCTCAG
--CACTTCCTCT-
 A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CACAGTDCCTCAG
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CACAGTDCCTCAG
NWAACCACADNN------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CACAGTDCCTCAG
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CACAGTDCCTCAG
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CACAGTDCCTCAG
AAACCACAGAN------
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CACAGTDCCTCAG
AAACCACAGC-------
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CACAGTDCCTCAG
NAAACCACAG--------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T C A T G A G T C A T G C A C G T A G T C C G T A T C A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T