Information for 2-CMTCTGCCTTGMC (Motif 12)

A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
Reverse Opposite:
C T A G A C G T T G A C G T C A C T G A A C T G A C T G T A G C C G T A A T C G C T G A C A G T A C T G
p-value:1e-12
log p-value:-2.787e+01
Information Content per bp:1.716
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif187.1
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets42.2 +/- 21.2bp
Average Position of motif in Background51.6 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------CMTCTGCCTTGMC
CCNNACCATCTGGCCTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CMTCTGCCTTGMC
ACCATCTGTT-----
 A C G T A C G T A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CMTCTGCCTTGMC
GCCATCTGTT-----
 A C G T A C G T A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CMTCTGCCTTGMC
NVCAGCTGBBNN---
 A C G T A C G T A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CMTCTGCCTTGMC
SNGCACCTGCHS----
 A C G T A C G T A C G T A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CMTCTGCCTTGMC
TGACCTTTGCCCTA--
 A C G T A C G T A C G T A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CMTCTGCCTTGMC
---CTGCCCGCA-
 A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CMTCTGCCTTGMC
GCCAGCTGBTNB---
 A C G T A C G T A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CMTCTGCCTTGMC
CGACCAACTGCCGTG--
 A C G T A C G T A C G T A C G T A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CMTCTGCCTTGMC
CGACCAACTGCCATGC-
 A C G T A C G T A C G T A C G T A G T C G T C A A G C T A T G C G C A T A T C G A G T C A G T C G A C T C A G T A C T G T G C A A G T C
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T