Information for 4-AGVTGTCATTTCC (Motif 9)

C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C T G A C G T A A C G T A C T G C G T A A G T C G T C A A G C T A T G C A C G T
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 21.7bp
Average Position of motif in Background46.3 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGVTGTCATTTCC
ARNTGACA-----
 C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGVTGTCATTTCC-
--GTTTCACTTCCG
 C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C A C G T
A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGVTGTCATTTCC-
GARTGGTCATCGCCC
 A C G T C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGVTGTCATTTCC
AACGAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGVTGTCATTTCC
AATTACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGVTGTCATTTCC
----GTCATN---
 C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGVTGTCATTTCC
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGVTGTCATTTCC
AGGGAAGTCATTTCT
 A C G T A C G T C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGVTGTCATTTCC
AAAGACCTGTCAATCC-
 A C G T A C G T A C G T A C G T C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.62
Offset:7
Orientation:forward strand
Alignment:AGVTGTCATTTCC----
-------ATTTCCTGTN
 C G T A A T C G T C G A A C G T A C T G C G A T A G T C C G T A A C G T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G