Information for 1-AGGCAAAGGAGGA (Motif 5)

C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A
Reverse Opposite:
A G C T A G T C A G T C A C G T G T A C A G T C G A C T A G C T C G A T A C T G G T A C G T A C A G C T
p-value:1e-12
log p-value:-2.804e+01
Information Content per bp:1.764
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif74.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets60.0 +/- 25.9bp
Average Position of motif in Background49.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:AGGCAAAGGAGGA---
------GGGAGGACNG
 C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ZNF263/MA0528.1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGGCAAAGGAGGA---
GGAGGAGGAGGGGGAGGAGGA
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGGCAAAGGAGGA
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAAAGGAGGA-----
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGCAAAGGAGGA----
-TGCGGAGTGGGACTGG
 C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAAGGAGGA
WATGCAAATGAG--
 A C G T C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGGCAAAGGAGGA----
---AAAAAGAGGAAGTA
 C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGGCAAAGGAGGA
CAGGCCNNGGCCNN
 A C G T C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAAGGAGGA
TATGCWAATBAV--
 A C G T C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGGCAAAGGAGGA
AATATGCAAATTAG--
 A C G T A C G T A C G T C T G A A C T G A C T G T G A C C G T A C T G A C G T A C T A G C A T G G T C A A C T G T A C G C T G A
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T