Information for 4-CCTCCTGASCAATGTC (Motif 4)

G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
Reverse Opposite:
A T C G T C G A T G A C C T G A A C G T C A G T A C T G T A C G G C A T T A G C C G T A A C T G A C T G C G T A C T A G A C T G
p-value:1e-13
log p-value:-3.049e+01
Information Content per bp:1.672
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif110.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.9 +/- 26.1bp
Average Position of motif in Background51.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTCCTGASCAATGTC
CCTGCTGAGH------
 G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCTGASCAATGTC
CCCCCTGCTGTG-------
 A C G T A C G T A C G T G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTCCTGASCAATGTC
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCTGASCAATGTC
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCTGASCAATGTC
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCTCCTGASCAATGTC
NNCACCTGNN-------
 A C G T G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCTGASCAATGTC
ACTTCCTGTT-------
 A C G T G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCTCCTGASCAATGTC-
--GYCTGGYYTNTGTCA
 G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C A C G T
A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCTGASCAATGTC
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCTCCTGASCAATGTC
ACCACCTGTT-------
 A C G T G T A C A G T C G C A T T A G C A G T C C G A T A T C G C G T A A T G C G T A C G T C A T G C A A G C T A C T G A C G T T A G C
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T