Information for 10-CATCTGCCTCACA (Motif 20)

A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C G T A A C T G A C T G G T A C G T C A A C T G G T C A A C G T A C T G
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.942
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.4 +/- 29.8bp
Average Position of motif in Background34.6 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CATCTGCCTCACA
CCNNACCATCTGGCCTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCCTCACA
ACCATCTGTT-----
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCCTCACA
GCCATCTGTT-----
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATCTGCCTCACA------
VCAKCTGGNNNCCAGMTGBN
 A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGCCTCACA
GCCAGCTGBTNB---
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGCCTCACA
NVCAGCTGBBNN---
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCCTCACA
TGCAGCTGTCCCT--
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CATCTGCCTCACA
NAACATCTGGATN---
 A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATCTGCCTCACA---
-ATTTGCATAACAAAG
 A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A A C G T A C G T A C G T
A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CATCTGCCTCACA
NNGCAGCTGTC-----
 A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C G T C A A G T C C G T A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T