Information for 9-GCATGCACTAATA (Motif 18)

A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A
Reverse Opposite:
A G C T C G T A A C G T A C G T C G T A A T C G A C G T A C T G A G T C C G T A A C G T A C T G G T A C
p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 20.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCATGCACTAATA-
TTATGTACTAATAA
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

ZNF410/MA0752.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCATGCACTAATA---
TCCATCCCATAATACTC
 A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCATGCACTAATA
GTGCGCATGCGC-----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCATGCACTAATA
-----CACTAATT
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCATGCACTAATA
TBGCACGCAA-----
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCATGCACTAATA--
NNCATTCATTCATNNN
 A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0110.1_Nkx1-2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCATGCACTAATA-------
---TGNACTAATTAGTGNAN
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T A C G G A T C T G C A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A G C T A C T G T G A C G T C A G T A C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCATGCACTAATA
--AAGCACTTAA-
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCATGCACTAATA
CTGCGCATGCGC-----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCATGCACTAATA-----
--NTGNGCTAATTACCNN
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T