Information for 5-GCATGTATATCTA (Motif 10)

A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
Reverse Opposite:
C G A T C G T A A C T G C T G A G A C T G C T A A G C T C G T A A G T C C G T A A C G T A C T G G T A C
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.780
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.9 +/- 11.4bp
Average Position of motif in Background71.0 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0087.1_Irx6/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCATGTATATCTA
AAAATACATGTAAAAAT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCATGTATATCTA
TAAATACATGTAAAATT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCATGTATATCTA
AAAATACATGTAATACT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCATGTATATCTA
GCACGTAY-----
 A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCATGTATATCTA
AATATACATGTAAAATT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCATGTATATCTA
AATATACATGTAAAACA-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCATGTATATCTA
VCAGGTRDRY---
 A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCATGTATATCTA
AATATACATGTAATATA-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCATGTATATCTA
BGCACGTA------
 A C G T A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCATGTATATCTA
GCACGTACCC---
 A C T G A G T C C G T A C G A T A C T G A C G T C T G A C A G T C T G A A G C T G T A C C G A T C G T A
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T