Information for 12-CTGAGGTGAC (Motif 24)

A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C
Reverse Opposite:
A C T G C G A T A G T C C G T A T A G C G T A C C G A T A G T C C T G A A C T G
p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.829
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif161.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets57.5 +/- 27.0bp
Average Position of motif in Background47.6 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTGAGGTGAC
ATGGGGTGAT
 A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTGAGGTGAC
GTGGGGTGAT
 A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGTGAC
CGGTGACGTCAC
 A C G T A C G T A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTGAGGTGAC-
---AGGTGTCA
 A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C A C G T
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGAGGTGAC
-TRAGGTCA-
 A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGAGGTGAC-----
GCGGAGGTGTCGCCTC
 A C G T A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C A C G T A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGGTGAC---
GATGACGTGGCANT
 A C G T A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C A C G T A C G T A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

CREB1/MA0018.2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGAGGTGAC
-TGACGTCA-
 A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C
A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGAGGTGAC
GCTGTGGTTT-
 A C G T A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGAGGTGAC--
GTGGCGTGACNG
 A G T C G A C T C T A G C G T A A C T G A T C G A C G T T C A G G C T A T G A C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G