Information for 11-AKGAGCTTMGCAG (Motif 17)

T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A T G C A C T G T G C A C G T A A C T G A G T C A C G T A T G C G T A C A G C T
p-value:1e-9
log p-value:-2.259e+01
Information Content per bp:1.761
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif66.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets52.8 +/- 23.3bp
Average Position of motif in Background52.7 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AKGAGCTTMGCAG
CGGAGC-------
 T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AKGAGCTTMGCAG
--CAGCC------
 T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AKGAGCTTMGCAG
GGGAGGACNG---
 T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AKGAGCTTMGCAG-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AKGAGCTTMGCAG
CGCAGCTGCG---
 T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AKGAGCTTMGCAG----
-----CACAGCAGGGGG
 T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AKGAGCTTMGCAG------
----DCHCAGCAGGRGGCC
 T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AKGAGCTTMGCAG
NTAATGAGCT------
 A C G T A C G T A C G T T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AKGAGCTTMGCAG----
--GAGCACAGCAGGACA
 T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------AKGAGCTTMGCAG
GACGATAATGAGCTTGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C A T G A T C G C G T A A C T G A G T C C G A T A C G T T G A C A T C G G T A C C T G A A C T G
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T A C G T A C G T