Information for 10-GTGAGCGTCTGGS (Motif 16)

C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G
Reverse Opposite:
A T G C A T G C A G T C C G T A A C T G G T C A A T G C A C T G A G T C C G A T A G T C C T G A G A T C
p-value:1e-10
log p-value:-2.406e+01
Information Content per bp:1.841
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.5 +/- 26.5bp
Average Position of motif in Background54.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTGAGCGTCTGGS
--VBSYGTCTGG-
 C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGAGCGTCTGGS---
-GGNGCGNCTGTTNNN
 C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GTGAGCGTCTGGS
----CTGTCTGG-
 C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GTGAGCGTCTGGS--
-----GGTCTGGCAT
 C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTGAGCGTCTGGS
---AACATCTGGA
 C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTGAGCGTCTGGS--
---NVCAGCTGBBNN
 C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G A C G T A C G T
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGAGCGTCTGGS----
NNTNNTGTCTGGNNTNG
 C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTGAGCGTCTGGS
---ANCAGCTG--
 C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGAGCGTCTGGS-
GGGGCTYGKCTGGGA
 A C G T C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGAGCGTCTGGS
----TWGTCTGV-
 C T A G A G C T A C T G C G T A A C T G A G T C A T C G A C G T A G T C A C G T A C T G A T C G A T C G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T