Information for 3-AACMKGAGTGCTG (Motif 7)

C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T A C A C T G A C T G A C G T A C G T
p-value:1e-11
log p-value:-2.641e+01
Information Content per bp:1.915
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.5 +/- 25.6bp
Average Position of motif in Background49.3 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AACMKGAGTGCTG
--CTTGAGTGGCT
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AACMKGAGTGCTG
---TTRAGTGSYK
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AACMKGAGTGCTG
--CTYRAGTGSY-
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AACMKGAGTGCTG
---TTAAGTGCTT
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AACMKGAGTGCTG
---TTGAGTGSTT
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AACMKGAGTGCTG
--BTBRAGTGSN-
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.55
Offset:8
Orientation:forward strand
Alignment:AACMKGAGTGCTG-----
--------TGCTGACTCA
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AACMKGAGTGCTG--
----AATTTGCTGAC
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AACMKGAGTGCTG------
----AAANTGCTGACTNAG
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AACMKGAGTGCTG
--------NGCTN
 C G T A G T C A A G T C G T A C A C T G A C T G C T G A C T A G A C G T A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G