Information for 19-GTAAGGGGTATAG (Motif 33)

A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T C G T A A G T C A G T C A G T C A G T C A C G T A C G T C G T A A G T C
p-value:1e-5
log p-value:-1.378e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.5 +/- 18.4bp
Average Position of motif in Background57.9 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTAAGGGGTATAG
--AAGAGGATTAG
 A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTAAGGGGTATAG
TTAAGTGGT----
 A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTAAGGGGTATAG
-GGAGGGGGAA--
 A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAAGGGGTATAG
TGTCAGGGGGCG--
 A C G T A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTAAGGGGTATAG
TTAAGTGGN----
 A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTAAGGGGTATAG
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTAAGGGGTATAG---
GCTGGGGGGTACCCCTT
 A C G T A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTAAGGGGTATAG
-TAAGGCGTCTTG
 A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G
A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTAAGGGGTATAG-----
-AATGGGGTATCACGTTT
 A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTAAGGGGTATAG-----
-AATAGGGTATCATATAT
 A C T G A C G T C G T A C G T A A C T G A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T