Information for 12-AGAATTATTT (Motif 23)

G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A T G C A C G T A C G A T C T G A C G T A A C G T A C G T A T G C C A G T
p-value:1e-8
log p-value:-2.063e+01
Information Content per bp:1.836
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif99.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets51.7 +/- 21.4bp
Average Position of motif in Background47.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:AGAATTATTT
--AATTATT-
 G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGAATTATTT----
AAAATTGTTATGAA
 G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PH0149.1_Pou3f4/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGAATTATTT-----
AATTAATTAATTAATTC
 A C G T A C G T G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGAATTATTT----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PH0142.1_Pou1f1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGAATTATTT-----
GATTAATTAATTAAGTC
 A C G T A C G T G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C

Lhx3/MA0135.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGAATTATTT----
-AAATTAATTAATC
 G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

Dlx1/MA0879.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGAATTATTT
CCTAATTATC-
 A C G T G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGAATTATTT---
NNNGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0028.1_En1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGAATTATTT---
GNATTAATTAGTTNNC
 A C G T A C G T A C G T G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

Dlx2/MA0885.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGAATTATTT
GCAATTAA--
 G T C A T A C G G T C A G T C A C G A T A G C T C G T A A C G T A C G T A C G T
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T