Information for 10-CCGGATTTCTCCC (Motif 20)

A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A C T G C G T A G T C A C G T A A C G T A G T C A G T C A C T G A C T G
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.0 +/- 14.6bp
Average Position of motif in Background30.7 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGGATTTCTCCC
ACCCGGATGTA----
 A C G T A C G T A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CCGGATTTCTCCC
AANNATCCGGATGTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCGGATTTCTCCC
ACCGGAAGTG----
 A C G T A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCGGATTTCTCCC
AAACCGGTTT------
 A C G T A C G T A C G T A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ETV4/MA0764.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGGATTTCTCCC
ACCGGAAGTA----
 A C G T A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
C T G A T A G C T G A C A T C G A C T G C T G A G C T A T C A G A G C T C T G A A C G T A C G T A C G T A C G T

ETV1/MA0761.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGGATTTCTCCC
ACCGGAAGTA----
 A C G T A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T G A A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCGGATTTCTCCC
ANCAGGATGT-----
 A C G T A C G T A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

FEV/MA0156.2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGGATTTCTCCC
ACCGGAAGTG----
 A C G T A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
C G T A T G A C T G A C C T A G C A T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGGATTTCTCCC-
CTGGCAGNCTGCCA
 A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

ERG/MA0474.2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCGGATTTCTCCC
ACCGGAAGTG----
 A C G T A G T C A G T C A C T G A C T G G T C A A C G T A C G T C G A T A G T C C G A T A G T C A G T C A G T C
C G T A T G A C T G A C C T A G A C T G G T C A G C T A T C A G A G C T T A C G A C G T A C G T A C G T A C G T