Information for 2-CGTGTCTGTAATGGGT (Motif 2)

A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
Reverse Opposite:
C T G A A G T C A G T C A G T C G C T A A C G T A C G T C G T A A G T C C G T A T A C G G T C A A G T C C G T A A G T C A C T G
p-value:1e-13
log p-value:-3.055e+01
Information Content per bp:1.917
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.4 +/- 24.0bp
Average Position of motif in Background50.8 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BSX/MA0876.1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CGTGTCTGTAATGGGT
-------NTAATTGG-
 A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CGTGTCTGTAATGGGT
------GKTAATGR--
 A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CGTGTCTGTAATGGGT
-------CTAATCGNT
 A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CGTGTCTGTAATGGGT-
-------NTAATKGTTT
 A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

GSX2/MA0893.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CGTGTCTGTAATGGGT
------NTTAATTAGN
 A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CGTGTCTGTAATGGGT
-------NTAATTGN-
 A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGTGTCTGTAATGGGT
VBSYGTCTGG-------
 A C G T A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGTGTCTGTAATGGGT
NNTNNTGTCTGGNNTNG--
 A C G T A C G T A C G T A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGTGTCTGTAATGGGT
AGGACGCTGTAAAGGGA
 A C G T A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Nobox/MA0125.1/Jaspar

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CGTGTCTGTAATGGGT
--------TAATTGGT
 A G T C C T A G A C G T A C T G A C G T A G T C A C G T C T A G C G A T C G T A C G T A C A G T A C T G C T A G A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T