Information for 9-GVCKTCGCAGGGA (Motif 19)

A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C G T A C T G A G T C A T C G G T C A G T C A A C T G A T C G A T G C
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.809
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 26.8bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GVCKTCGCAGGGA
GGGGCTYGKCTGGGA
 A C G T A C G T A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GVCKTCGCAGGGA
AAGGKGRCGCAGGCA
 A C G T A C G T A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GVCKTCGCAGGGA-
--CACAGCAGGGGG
 A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GVCKTCGCAGGGA
-----CACAGN--
 A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GVCKTCGCAGGGA---
------ACAGGAAGTG
 A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GVCKTCGCAGGGA--
-----NACAGGAAAT
 A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GVCKTCGCAGGGA--
-----NACAGGAAAT
 A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GVCKTCGCAGGGA---
------GCAGTGATTT
 A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GVCKTCGCAGGGA---
-DCHCAGCAGGRGGCC
 A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GVCKTCGCAGGGA---
------VCAGGTRDRY
 A T C G T A G C A G T C A C G T C A G T A T G C C T A G A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C