Information for 8-GGAGTGGGCTTTG (Motif 18)

A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A T A C G A G T C A G T C A G T C C G T A A T G C A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 13.1bp
Average Position of motif in Background43.4 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGAGTGGGCTTTG
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAGTGGGCTTTG---
NNATTGGACTTTNGNN
 A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGAGTGGGCTTTG------
----TGGACTTTGNNCTCN
 A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGAGTGGGCTTTG-------
----TGGACTTTGNNCTNTG
 A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGAGTGGGCTTTG-----
--ATTGGACTTTGACCCC
 A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

SP8/MA0747.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGAGTGGGCTTTG-
--AGTGGGCGTGGC
 A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T
A C G T A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAGTGGGCTTTG
GGGGGGGG-----
 A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G
C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTGGGCTTTG
GGGGGCGTGGN-----
 A C G T A C G T A C G T A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G
C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGAGTGGGCTTTG-
--RGTGGGYGTGGC
 A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGAGTGGGCTTTG-
--AGGVNCCTTTGT
 A C T G A C T G C G T A A T C G C G A T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T
A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T