Information for 7-CCTCTCTAGCAGC (Motif 17)

G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C
Reverse Opposite:
A T C G T A G C A C G T A T C G A G T C G A C T C T G A A C T G C T G A A C T G T C G A C A T G A C T G
p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.769
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif109.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets47.9 +/- 21.0bp
Average Position of motif in Background47.9 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTCTCTAGCAGC
-GGCTCYAKCAYC
 G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTCTCTAGCAGC
AGCCACTCAAG----
 A C G T A C G T G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTCTCTAGCAGC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTCTAGCAGC
NSCACTYVAV----
 A C G T G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCTCTCTAGCAGC---
-TACCATAGCAACGGT
 G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C A C G T A C G T A C G T
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCTCTCTAGCAGC--
---SCCTAGCAACAG
 G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTCTCTAGCAGC
RSCACTYRAG----
 A C G T G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTCTCTAGCAGC
AASCACTCAA-----
 A C G T A C G T G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTCTCTAGCAGC---
-CCGCATAGCAACGGA
 G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C A C G T A C G T A C G T
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCTCTCTAGCAGC-
-CTGTCTGTCACCT
 G T A C G A T C A C G T A G T C G A C T G T A C A G C T C G T A A C T G A T G C G T C A A C T G A T G C A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T