Information for 6-CCAGCAATGATGA (Motif 4)

G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
Reverse Opposite:
C A G T A T G C G T C A G A C T A G T C G C T A A C G T A C G T A C T G G A T C A C G T A C T G A C T G
p-value:1e-13
log p-value:-3.092e+01
Information Content per bp:1.776
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif22.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.6 +/- 27.6bp
Average Position of motif in Background34.0 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCAGCAATGATGA
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCAGCAATGATGA
CCWGGAATGY---
 G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAGCAATGATGA
GCCATAAATCA---
 A C G T G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCAGCAATGATGA
-CACTAATT----
 G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCAGCAATGATGA
-NAACAAT-----
 G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCAGCAATGATGA
--AACAAT-----
 G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCAGCAATGATGA
HWWGTCAGCAWWTTT--
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCAGCAATGATGA
TCATCAATCA---
 G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCAGCAATGATGA
GGCCATAAATCA---
 A C G T A C G T G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCAGCAATGATGA
GGCCATAAATCA---
 A C G T A C G T G T A C A G T C C G T A C A T G T G A C C G T A T C G A C A G T C T A G C G T A A C G T A T C G G T C A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T