Information for 7-AGGCATTTYCAGCAGG (Motif 7)

T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G
Reverse Opposite:
G T A C A G T C C G A T A T C G A G T C A G C T A C T G C T G A G T C A C T G A T G C A A C G T A C T G T A G C A G T C A G C T
p-value:1e-12
log p-value:-2.841e+01
Information Content per bp:1.788
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 26.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGCATTTYCAGCAGG
GGGAATTTCC------
 T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCATTTYCAGCAGG
GGGAATTTCC------
 T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AGGCATTTYCAGCAGG
------DCTCAGCAGG
 T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGCATTTYCAGCAGG
-GCTATTTTTAGC---
 T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AGGCATTTYCAGCAGG---
-------CACAGCAGGGGG
 T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGCATTTYCAGCAGG
GGGGATTTCC------
 T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGGCATTTYCAGCAGG
--CCACTTCCGGC---
 T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G
A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGGCATTTYCAGCAGG
NGGGGATTTCCC-----
 A C G T T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AGGCATTTYCAGCAGG-----
------DCHCAGCAGGRGGCC
 T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGGCATTTYCAGCAGG
----ATTTCCTGTN--
 T C G A A C T G A T C G G T A C G T C A A C G T A G C T A C G T A G C T G T A C C T G A A C T G A T G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T