Information for 5-GCCCTCTRGCGTTGAA (Motif 5)

A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
Reverse Opposite:
A C G T A C G T T A G C C T G A C G T A G A T C A C T G G T A C A G T C C T G A C T A G C T G A A C T G A C T G C A T G G T A C
p-value:1e-12
log p-value:-2.917e+01
Information Content per bp:1.720
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.4 +/- 21.8bp
Average Position of motif in Background19.2 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTRGCGTTGAA
NTGCCCTTGGGCGN----
 A C G T A C G T A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCCTCTRGCGTTGAA
--GGTCTGGCAT----
 A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCTRGCGTTGAA
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTRGCGTTGAA
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTRGCGTTGAA
NTGCCCANNGGTNA----
 A C G T A C G T A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCTRGCGTTGAA
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCTRGCGTTGAA
TGACCTTTGACCTC---
 A C G T A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCTRGCGTTGAA
TGACCTCTGACCCCN--
 A C G T A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCCCTCTRGCGTTGAA
ATGCCCTGAGGC------
 A C G T A C G T A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTRGCGTTGAA
NTGCCCTAGGGCAA----
 A C G T A C G T A C T G G A T C T A G C G T A C A G C T A G T C A G C T C T A G A C T G G T A C C A T G A C G T A G C T A T C G T G C A G T C A
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T A C G T A C G T A C G T