Information for 10-GGARAGGCTTTCC (Motif 13)

A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C
Reverse Opposite:
T C A G A C T G C T G A C T G A C G T A A C T G A G T C A G T C A G C T A G C T C G A T A G T C A G T C
p-value:1e-9
log p-value:-2.151e+01
Information Content per bp:1.853
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.9 +/- 25.6bp
Average Position of motif in Background47.1 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGARAGGCTTTCC
---GGGGATTTCC
 A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGARAGGCTTTCC
---GGGGATTTCC
 A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGARAGGCTTTCC--
GGNGCGNCTGTTNNN
 A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGARAGGCTTTCC
---GGGAATTTCC
 A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGARAGGCTTTCC-
--NGGGGATTTCCC
 A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C A C G T
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGARAGGCTTTCC
GGGGNGGGGC-----
 A C G T A C G T A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGARAGGCTTTCC
DGGGYGKGGC-----
 A C G T A C G T A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGARAGGCTTTCC
AGGGGGCGGGGCTG---
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGARAGGCTTTCC
-----NGCTN---
 A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGARAGGCTTTCC-
AGAAATGACTTCCCT
 A C G T A C T G A C T G C G T A C T G A C T G A A C T G C T A G A G T C A C G T A G C T A G C T A G T C A G T C A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T