Information for 7-TCGCSCCGCTCCC (Motif 9)

A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C T G A A T C G A G T C A C T G T A C G T A C G C T A G A G T C A C T G C G T A
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.847
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets64.3 +/- 23.7bp
Average Position of motif in Background52.6 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCGCSCCGCTCCC
-GGCCCCGCCCCC
 A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCGCSCCGCTCCC-
--GCTCCGCCCMCY
 A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGCSCCGCTCCC-----
-GGTCCCGCCCCCTTCTC
 A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.63
Offset:7
Orientation:forward strand
Alignment:TCGCSCCGCTCCC
-------GCTCCG
 A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCGCSCCGCTCCC----
--GCCCCGCCCCCTCCC
 A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCGCSCCGCTCCC
--GCCCCGCCCCC
 A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCGCSCCGCTCCC---
TAAGCCACGCCCCCTTT
 A C G T A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCGCSCCGCTCCC-
--GCCMCGCCCMCY
 A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C A C G T
A C G T A C G T T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

KLF16/MA0741.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCGCSCCGCTCCC
--GCCACGCCCCC
 A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C
A C G T A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCGCSCCGCTCCC---
--CCCCCGCCCCCGCC
 A C G T A G T C A C T G A G T C A T G C A T G C A G T C A C T G A T G C A G C T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C