Information for 4-GCTCCCAGCATGC (Motif 5)

A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C G T C A A C G T A C T G A T G C A C G T A C T G A C T G A C T G C G T A C A T G A G T C
p-value:1e-12
log p-value:-2.964e+01
Information Content per bp:1.914
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 31.5bp
Average Position of motif in Background66.9 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCAGCATGC-
ATTTCCCAGVAKSCY
 A C G T A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCTCCCAGCATGC--
CCACACAGCAGGAGA
 A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTCCCAGCATGC--
CCACACAGCAGGAGA
 A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTCCCAGCATGC--
GAGCACAGCAGGACA
 A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCTCCCAGCATGC
--DCTCAGCAGG-
 A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCTCCCAGCATGC----
-TACCCACAATGCATTG
 A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCTCCCAGCATGC--
---CACAGCAGGGGG
 A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTCCCAGCATGC----
--DCHCAGCAGGRGGCC
 A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:9
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------GCTCCCAGCATGC
AACTACAATTCCCAGAATGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GCTCCCAGCATGC
RACTACAACTCCCAGVAKGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C G T A G T C A G T C A G T C C G T A A T C G A G T C C G T A A C G T A C T G A G T C
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C