Information for 14-CTRACAGRAG (Motif 23)

A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G
Reverse Opposite:
A T G C A C G T A G T C A G T C A C G T A C T G C G A T G A C T T G C A A T C G
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.758
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif131.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets52.9 +/- 22.3bp
Average Position of motif in Background51.9 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTRACAGRAG
VBTGWCAGCB-
 A C G T A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTRACAGRAG
RHTGWCAR---
 A C G T A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTRACAGRAG
TTGACAGC--
 A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTRACAGRAG
--CACAGN--
 A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTRACAGRAG-
SCTGTCARCACC
 A C G T A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTRACAGRAG---
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTRACAGRAG
ARNTGACA----
 A C G T A C G T A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTRACAGRAG
TTGACAG---
 A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTRACAGRAG
TTGACAGG--
 A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTRACAGRAG-----
ATTTACAGTAGCAAAA
 A C G T A T G C A C G T C T G A G C T A G T A C C G T A A C T G T C A G G T C A A T C G A C G T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A