Information for 9-CAGCCATCTT (Motif 18)

G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T
Reverse Opposite:
C T G A C T G A C A T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G
p-value:1e-9
log p-value:-2.107e+01
Information Content per bp:1.842
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif411.5
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets53.4 +/- 27.9bp
Average Position of motif in Background53.5 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCATCTT-
GCNGCCATCTTG
 A C G T G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCATCTT-
GCCGCCATCTTG
 A C G T G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAGCCATCTT
GTCCGCCATTA-
 A C G T A C G T G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAGCCATCTT--
--GCCATCTGTT
 G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCATCTT-----
CCNNACCATCTGGCCTN
 A C G T A C G T G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGCCATCTT--
--ACCATCTGTT
 G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAGCCATCTT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCCATCTT
GYCATCMATCAT
 A C G T A C G T G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGCCATCTT
-TGCCAA---
 G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGCCATCTT--
--RCCATMTGTT
 G T A C T G C A A T C G A G T C A G T C G T C A A C G T G T A C A G C T A G C T A C G T A C G T
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T